LOCUS hCP_omega_GUS_fixe 2442 bp ds-DNA linear 25-AUG-2009 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers CDS 77..153 /function="transport protein" /note="ORF3" /codon_start=1 /product="29K" /protein_id="CAA82560.1" /db_xref="GI:488715" /db_xref="GOA:Q88605" /db_xref="InterPro:IPR001022" /db_xref="UniProtKB/TrEMBL:Q88605" /translation="MSIVSYEPKVSDFLNLSKKEEILPKALTRLKTVSISTKDIISVK ESETLCDIDLLINVPLDKYRYVGILGAVFTGEWLVPDFVKGGVTISVIDKRLANSKEC VIGTYRAAAKSKRFQFKLVPNYFVSTVDAKRKPWQVHVRIQDLKIEAGWQPLALEVVS VAMVTNNVVMKGLREKVVAINDPDVEGFEGVVDEFVDSVAAFKAVDNFKRRKKKVEEK GVVSKYKYRPEKYAGPDSFNLKEENVLQHYKPESVPVFRSGVGRAHSDA" /label=MP, 29K /ApEinfo_fwdcolor=#c6ffbf /ApEinfo_revcolor=#c6ffbf CDS 77..550 /function="coat protein" /note="ORF4" /codon_start=1 /product="18K" /protein_id="CAA82561.1" /db_xref="GI:488716" /db_xref="GOA:Q88606" /db_xref="HSSP:P03580" /db_xref="InterPro:IPR001337" /db_xref="UniProtKB/TrEMBL:Q88606" /translation="MSYNITNPNQYQYFAAVWAEPIPMLNQCISALSQSYQTQAARDT VRQQFSNLLSAVVAPSQRFPETGSRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESR PSASEVRNATQRVDDATVSIRSQIQLLLSELSSGHGYMNRAEFEALVPWTTAAAT" /label=CP, 18K /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 misc_feature complement(624..629) /label=SalI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 280..284 /label=SmaI /ApEinfo_fwdcolor=#ff0006 /ApEinfo_revcolor=#ff0006 misc_feature complement(551..556) /label=HindIII /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 557..623 /label=TMV UI omega leader 2-68 (-1 to -67 in resp. to AUG /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan misc_feature 631..2442 /label=GUS /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature complement(629..634) /label=NcoI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature complement(1..76) /label=hairpin /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan ORIGIN 1 gggcgaattg ggtaccgggc cccccctcga ggtcgacggt atcgataccg tcgacctcga 61 gggggggccc ggtaccATGT CTTACAACAT TACAAACCCG AATCAGTACC AGTATTTCGC 121 AGCGGTGTGG GCAGAGCCCA TTCCGATGCT TAACCAGTGC ATATCGGCAT TGTCACAATC 181 GTACCAAACA CAAGCTGCGA GAGACACTGT TAGACAGCAA TTCTCAAACT TGTTGAGTGC 241 GGTTGTGGCT CCGAGCCAGC GGTTCCCAGA AACAGGGTCC CGGGTGTATG TTAACTCGGC 301 TGTTATAAAG CCGTTGTACG AGGCTCTTAT GAAGTCCTTT GATACTAGAA ATAGGATCAT 361 AGAGACGGAA GAGGAGTCAC GCCCGTCAGC TTCCGAAGTA CGTAACGCGA CACAACGTGT 421 TGATGATGCG ACCGTTTCCA TTAGAAGTCA AATTCAGCTG TTGCTGAGCG AGCTTTCCAG 481 TGGACATGGT TATATGAACA GGGCAGAGTT CGAGGCTTTG GTGCCATGGA CTACTGCTGC 541 TGCTACTTAG aagctttatt tttacaacaa ttaccaacaa caacaaacaa caaacaacat 601 tacaattact atttacaatt acagtcgacc ATGGTCCGTC CTGTAGAAAC CCCAACCCGT 661 GAAATCAAAA AACTCGACGG CCTGTGGGCA TTCAGTCTGG ATCGCGAAAA CTGTGGAATT 721 GATCAGCGTT GGTGGGAAAG CGCGTTACAA GAAAGCCGGG CAATTGCTGT GCCAGGCAGT 781 TTTAACGATC AGTTCGCCGA TGCAGATATT CGTAATTATG CGGGCAACGT CTGGTATCAG 841 CGCGAAGTCT TTATACCGAA AGGTTGGGCA GGCCAGCGTA TCGTGCTGCG TTTCGATGCG 901 GTCACTCATT ACGGCAAAGT GTGGGTCAAT AATCAGGAAG TGATGGAGCA TCAGGGCGGC 961 TATACGCCAT TTGAAGCCGA TGTCACGCCG TATGTTATTG CCGGGAAAAG TGTACGTATC 1021 ACCGTTTGTG TGAACAACGA ACTGAACTGG CAGACTATCC CGCCGGGAAT GGTGATTACC 1081 GACGAAAACG GCAAGAAAAA GCAGTCTTAC TTCCATGATT TCTTTAACTA TGCCGGAATC 1141 CATCGCAGCG TAATGCTCTA CACCACGCCG AACACCTGGG TGGACGATAT CACCGTGGTG 1201 ACGCATGTCG CGCAAGACTG TAACCACGCG TCTGTTGACT GGCAGGTGGT GGCCAATGGT 1261 GATGTCAGCG TTGAACTGCG TGATGCGGAT CAACAGGTGG TTGCAACTGG ACAAGGCACT 1321 AGCGGGACTT TGCAAGTGGT GAATCCGCAC CTCTGGCAAC CGGGTGAAGG TTATCTCTAT 1381 GAACTGTGCG TCACAGCCAA AAGCCAGACA GAGTGTGATA TCTACCCGCT TCGCGTCGGC 1441 ATCCGGTCAG TGGCAGTGAA GGGCGAACAG TTCCTGATTA ACCACAAACC GTTCTACTTT 1501 ACTGGCTTTG GTCGTCATGA AGATGCGGAC TTACGTGGCA AAGGATTCGA TAACGTGCTG 1561 ATGGTGCACG ACCACGCATT AATGGACTGG ATTGGGGCCA ACTCCTACCG TACCTCGCAT 1621 TACCCTTACG CTGAAGAGAT GCTCGACTGG GCAGATGAAC ATGGCATCGT GGTGATTGAT 1681 GAAACTGCTG CTGTCGGCTT TAACCTCTCT TTAGGCATTG GTTTCGAAGC GGGCAACAAG 1741 CCGAAAGAAC TGTACAGCGA AGAGGCAGTC AACGGGGAAA CTCAGCAAGC GCACTTACAG 1801 GCGATTAAAG AGCTGATAGC GCGTGACAAA AACCACCCAA GCGTGGTGAT GTGGAGTATT 1861 GCCAACGAAC CGGATACCCG TCCGCAAGGT GCACGGGAAT ATTTCGCGCC ACTGGCGGAA 1921 GCAACGCGTA AACTCGACCC GACGCGTCCG ATCACCTGCG TCAATGTAAT GTTCTGCGAC 1981 GCTCACACCG ATACCATCAG CGATCTCTTT GATGTGCTGT GCCTGAACCG TTATTACGGA 2041 TGGTATGTCC AAAGCGGCGA TTTGGAAACG GCAGAGAAGG TACTGGAAAA AGAACTTCTG 2101 GCCTGGCAGG AGAAACTGCA TCAGCCGATT ATCATCACCG AATACGGCGT GGATACGTTA 2161 GCCGGGCTGC ACTCAATGTA CACCGACATG TGGAGTGAAG AGTATCAGTG TGCATGGCTG 2221 GATATGTATC ACCGCGTCTT TGATCGCGTC AGCGCCGTCG TCGGTGAACA GGTATGGAAT 2281 TTCGCCGATT TTGCGACCTC GCAAGGCATA TTGCGCGTTG GCGGTAACAA GAAAGGGATC 2341 TTCACTCGCG ACCGCAAACC GAAGTCGGCG GCTTTTCTGC TGCAAAAACG CTGGACTGGC 2401 ATGAACTTCG GTGAAAAACC GCAGCAGGGA GGCAAACAAT GA //