LOCUS hCP_IREScp_GUS_fix 2541 bp ds-DNA linear 26-AUG-2009 DEFINITION . ACCESSION VERSION SOURCE . ORGANISM . COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers CDS 77..153 /function="transport protein" /note="ORF3" /codon_start=1 /product="29K" /protein_id="CAA82560.1" /db_xref="GI:488715" /db_xref="GOA:Q88605" /db_xref="InterPro:IPR001022" /db_xref="UniProtKB/TrEMBL:Q88605" /translation="MSIVSYEPKVSDFLNLSKKEEILPKALTRLKTVSISTKDIISVK ESETLCDIDLLINVPLDKYRYVGILGAVFTGEWLVPDFVKGGVTISVIDKRLANSKEC VIGTYRAAAKSKRFQFKLVPNYFVSTVDAKRKPWQVHVRIQDLKIEAGWQPLALEVVS VAMVTNNVVMKGLREKVVAINDPDVEGFEGVVDEFVDSVAAFKAVDNFKRRKKKVEEK GVVSKYKYRPEKYAGPDSFNLKEENVLQHYKPESVPVFRSGVGRAHSDA" /label=MP, 29K /ApEinfo_fwdcolor=#c6ffbf /ApEinfo_revcolor=#c6ffbf CDS 77..550 /function="coat protein" /note="ORF4" /codon_start=1 /product="18K" /protein_id="CAA82561.1" /db_xref="GI:488716" /db_xref="GOA:Q88606" /db_xref="HSSP:P03580" /db_xref="InterPro:IPR001337" /db_xref="UniProtKB/TrEMBL:Q88606" /translation="MSYNITNPNQYQYFAAVWAEPIPMLNQCISALSQSYQTQAARDT VRQQFSNLLSAVVAPSQRFPETGSRVYVNSAVIKPLYEALMKSFDTRNRIIETEEESR PSASEVRNATQRVDDATVSIRSQIQLLLSELSSGHGYMNRAEFEALVPWTTAAAT" /label=CP, 18K /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=#00ff00 misc_feature 280..284 /label=SmaI /ApEinfo_fwdcolor=#ff0006 /ApEinfo_revcolor=#ff0006 misc_feature complement(574..579) /label=KpnI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 730..2541 /label=GUS /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature complement(728..733) /label=NcoI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature complement(551..556) /label=HindIII /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature complement(1..76) /label=hairpin /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan misc_feature 551..552 /label=GFP /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature complement(580..585) /label=EcoRI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature complement(580..585) /label=EcoRI(1) /ApEinfo_label=EcoRI /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 580..727 /label=cpIRES_-1_to_-148 /ApEinfo_fwdcolor=#00ffff /ApEinfo_revcolor=#00ffff ORIGIN 1 gggcgaattg ggtaccgggc cccccctcga ggtcgacggt atcgataccg tcgacctcga 61 gggggggccc ggtaccATGT CTTACAACAT TACAAACCCG AATCAGTACC AGTATTTCGC 121 AGCGGTGTGG GCAGAGCCCA TTCCGATGCT TAACCAGTGC ATATCGGCAT TGTCACAATC 181 GTACCAAACA CAAGCTGCGA GAGACACTGT TAGACAGCAA TTCTCAAACT TGTTGAGTGC 241 GGTTGTGGCT CCGAGCCAGC GGTTCCCAGA AACAGGGTCC CGGGTGTATG TTAACTCGGC 301 TGTTATAAAG CCGTTGTACG AGGCTCTTAT GAAGTCCTTT GATACTAGAA ATAGGATCAT 361 AGAGACGGAA GAGGAGTCAC GCCCGTCAGC TTCCGAAGTA CGTAACGCGA CACAACGTGT 421 TGATGATGCG ACCGTTTCCA TTAGAAGTCA AATTCAGCTG TTGCTGAGCG AGCTTTCCAG 481 TGGACATGGT TATATGAACA GGGCAGAGTT CGAGGCTTTG GTGCCATGGA CTACTGCTGC 541 TGCTACTTAG aagcttatcg atttcgaacc cggggtaccg aattcgtcga ttcggttgca 601 gcatttaaag cggttgacaa ctttaaaaga aggaaaaaga aggttgaaga aaagggtgta 661 gtaagtaagt ataagtacag accggagaag tacgccggtc ctgattcgtt taatttgaaa 721 gaagaaaccA TGGTCCGTCC TGTAGAAACC CCAACCCGTG AAATCAAAAA ACTCGACGGC 781 CTGTGGGCAT TCAGTCTGGA TCGCGAAAAC TGTGGAATTG ATCAGCGTTG GTGGGAAAGC 841 GCGTTACAAG AAAGCCGGGC AATTGCTGTG CCAGGCAGTT TTAACGATCA GTTCGCCGAT 901 GCAGATATTC GTAATTATGC GGGCAACGTC TGGTATCAGC GCGAAGTCTT TATACCGAAA 961 GGTTGGGCAG GCCAGCGTAT CGTGCTGCGT TTCGATGCGG TCACTCATTA CGGCAAAGTG 1021 TGGGTCAATA ATCAGGAAGT GATGGAGCAT CAGGGCGGCT ATACGCCATT TGAAGCCGAT 1081 GTCACGCCGT ATGTTATTGC CGGGAAAAGT GTACGTATCA CCGTTTGTGT GAACAACGAA 1141 CTGAACTGGC AGACTATCCC GCCGGGAATG GTGATTACCG ACGAAAACGG CAAGAAAAAG 1201 CAGTCTTACT TCCATGATTT CTTTAACTAT GCCGGAATCC ATCGCAGCGT AATGCTCTAC 1261 ACCACGCCGA ACACCTGGGT GGACGATATC ACCGTGGTGA CGCATGTCGC GCAAGACTGT 1321 AACCACGCGT CTGTTGACTG GCAGGTGGTG GCCAATGGTG ATGTCAGCGT TGAACTGCGT 1381 GATGCGGATC AACAGGTGGT TGCAACTGGA CAAGGCACTA GCGGGACTTT GCAAGTGGTG 1441 AATCCGCACC TCTGGCAACC GGGTGAAGGT TATCTCTATG AACTGTGCGT CACAGCCAAA 1501 AGCCAGACAG AGTGTGATAT CTACCCGCTT CGCGTCGGCA TCCGGTCAGT GGCAGTGAAG 1561 GGCGAACAGT TCCTGATTAA CCACAAACCG TTCTACTTTA CTGGCTTTGG TCGTCATGAA 1621 GATGCGGACT TACGTGGCAA AGGATTCGAT AACGTGCTGA TGGTGCACGA CCACGCATTA 1681 ATGGACTGGA TTGGGGCCAA CTCCTACCGT ACCTCGCATT ACCCTTACGC TGAAGAGATG 1741 CTCGACTGGG CAGATGAACA TGGCATCGTG GTGATTGATG AAACTGCTGC TGTCGGCTTT 1801 AACCTCTCTT TAGGCATTGG TTTCGAAGCG GGCAACAAGC CGAAAGAACT GTACAGCGAA 1861 GAGGCAGTCA ACGGGGAAAC TCAGCAAGCG CACTTACAGG CGATTAAAGA GCTGATAGCG 1921 CGTGACAAAA ACCACCCAAG CGTGGTGATG TGGAGTATTG CCAACGAACC GGATACCCGT 1981 CCGCAAGGTG CACGGGAATA TTTCGCGCCA CTGGCGGAAG CAACGCGTAA ACTCGACCCG 2041 ACGCGTCCGA TCACCTGCGT CAATGTAATG TTCTGCGACG CTCACACCGA TACCATCAGC 2101 GATCTCTTTG ATGTGCTGTG CCTGAACCGT TATTACGGAT GGTATGTCCA AAGCGGCGAT 2161 TTGGAAACGG CAGAGAAGGT ACTGGAAAAA GAACTTCTGG CCTGGCAGGA GAAACTGCAT 2221 CAGCCGATTA TCATCACCGA ATACGGCGTG GATACGTTAG CCGGGCTGCA CTCAATGTAC 2281 ACCGACATGT GGAGTGAAGA GTATCAGTGT GCATGGCTGG ATATGTATCA CCGCGTCTTT 2341 GATCGCGTCA GCGCCGTCGT CGGTGAACAG GTATGGAATT TCGCCGATTT TGCGACCTCG 2401 CAAGGCATAT TGCGCGTTGG CGGTAACAAG AAAGGGATCT TCACTCGCGA CCGCAAACCG 2461 AAGTCGGCGG CTTTTCTGCT GCAAAAACGC TGGACTGGCA TGAACTTCGG TGAAAAACCG 2521 CAGCAGGGAG GCAAACAATG A //