LOCUS PBSCAtPRLuc 5390 bp ds-DNA circular SYN 14-JUN-2007 DEFINITION . ACCESSION . VERSION . SOURCE . ORGANISM . . FEATURES Location/Qualifiers misc_feature 1390..2017 /label=poliovirus_type1_Mahoney_IRES /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=cyan misc_feature 2036..2971 /label=RLuc /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature 579..1238 /label=CAT-1 /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green misc_feature 3030..3251 /label=SV40 late poly (A) signal /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 4371..5231 /label=beta-lactamase /ApEinfo_fwdcolor=#00ff59 /ApEinfo_revcolor=#00ff59 misc_feature 3597..4211 /label=replication region from pMB1 /ApEinfo_fwdcolor=#ff5600 /ApEinfo_revcolor=#ff5600 misc_feature 248..297 /label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 rep_origin 3612..3612 /note="pUC18 Ori; RNaseH cleavage point" /label=pUC18 Ori; RNaseH cleavage point /ApEinfo_fwdcolor=SlateGray3 /ApEinfo_revcolor=SlateGray3 misc_feature 298..351 /label=SV40 Promoter(1) /ApEinfo_label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 248..297 /label=Putative major transcription sites /ApEinfo_fwdcolor=#ff80c0 /ApEinfo_revcolor=#ff80c0 mRNA complement(361..419) /note="19S VP1" /label=19S VP1 /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 78..247 /label=SV40 Promoter(2) /ApEinfo_label=SV40 Promoter /ApEinfo_fwdcolor=#ff0000 /ApEinfo_revcolor=#ff0000 misc_feature 297..297 /label=transcription start +1 /ApEinfo_fwdcolor=#ff3880 /ApEinfo_revcolor=#ff3880 misc_feature 286..286 /label=transcription start +1(1) /ApEinfo_label=transcription start +1 /ApEinfo_fwdcolor=#ff2e7b /ApEinfo_revcolor=#ff2e7b misc_feature 248..248 /label=trasnscription_start +1 /ApEinfo_fwdcolor=#ff44be /ApEinfo_revcolor=#ff44be misc_feature 292..292 /label=transcription start +1(2) /ApEinfo_label=transcription start +1 /ApEinfo_fwdcolor=#ff3071 /ApEinfo_revcolor=#ff3071 ORIGIN 1 CTAGCTTCTG TGGAATGTGT GTCAGTTAGG GTGTGGAAAG TCCCCAGGCT CCCCAGCAGG 61 CAGAAGTATG CAAAGCATGC ATCTCAATTA GTCAGCAACC AGGTGTGGAA AGTCCCCAGG 121 CTCCCCAGCA GGCAGAAGTA TGCAAAGCAT GCATCTCAAT TAGTCAGCAA CCATAGTCCC 181 GCCCCTAACT CCGCCCATCC CGCCCCTAAC TCCGCCCAGT TCCGCCCATT CTCCGCCCCA 241 TGGCTGACTA ATTTTTTTTA TTTATGCAGA GGCCGAGGCC GCCTCGGCCT CTGAGCTATT 301 CCAGAAGTAG TGAGGAGGCT TTTTTGGAGG CCTAGGCTTT TGCAAAAAGC TCCCTCGAGG 361 aactggaaaa ccagaaagtt aactggtaag tttagtcttt ttgtctttta tttcaggtcC 421 CGGAATTGGT TTAAACGAAT TCGAGCTCGC CCGGGTACCG AGCTCGAATT GATCTCTCGA 481 GGAACTGAAA AGTTAACTGG TAAGTTTAGT CTTTTTGTCT TTTATTTCAG GTCCCGGATC 541 GAAGCTTGGC GAGATTTTCA GGAGCTAAGG AAGCTAAAAT GGAGAAAAAA ATCACTGGAT 601 ATACCACCGT TGATATATCC CAATGGCATC GTAAAGAACA TTTTGAGGCA TTTCAGTCAG 661 TTGCTCAATG TACCTATAAC CAGACCGTTC AGCTGGATAT TACGGCCTTT TTAAAGACCG 721 TAAAGAAAAA TAAGCACAAG TTTTATCCGG CCTTTATTCA CATTCTTGCC CGCCTGATGA 781 ATGCTCATCC GGAATTCCGT ATGGCAATGA AAGACGGTGA GCTGGTGATA TGGGATAGTG 841 TTCACCCTTG TTACACCGTT TTCCATGAGC AAACTGAAAC GTTTTCATCG CTCTGGAGTG 901 AATACCACGA CGATTTCCGG CAGTTTCTAC ACATATATTC GCAAGATGTG GCGTGTTACG 961 GTGAAAACCT GGCCTATTTC CCTAAAGGGT TTATTGAGAA TATGTTTTTC GTCTCAGCCA 1021 ATCCCTGGGT GAGTTTCACC AGTTTTGATT TAAACGTGGC CAATATGGAC AACTTCTTCG 1081 CCCCCGTTTT CACCATGGGC AAATATTATA CGCAAGGCGA CAAGGTGCTG ATGCCGCTGG 1141 CGATTCAGGT TCATCATGCC GTCTGTGATG GCTTCCATGT CGGCAGAATG CTTAATGAAT 1201 TACAACAGTA CTGCGATGAG TGGCAGGGCG GGGCGTAATT TTTTTAAGGC AGTTATTGGT 1261 GCCCTTAAAC GCCTGGTGCT ACGCCTGAAT AAGTGATAAT AAGCGGATGA ATGGCAGAAA 1321 TTCGCCGATC CCCGGGGATC CTCTAGAGTC GACCTGCAGA AGCTTGCGCA GACGTCGCGC 1381 GCGGCCGTTT TAAAACAGCT CTGGGGTTGT ACCCACCCCA GAGGCCCACG TGGCGGCTAG 1441 TACTCCGGTA TTGCGGTACC CTTGTACGCC TGTTTTATAC TCCCTTCCCG TAACTTAGAC 1501 GCACAAAACC AAGTTCAATA GAAGGGGGTA CAAACCAGTA CCACCACGAA CAAGCACTTC 1561 TGTTTCCCCG GTGATGTCGT ATAGACTGCT TGCGTGGTTG AAAGCGACGG ATCCGTTATC 1621 CGCTTATGTA CTTCGAGAAG CCCAGTACCA CCTCGGAATC TTCGATGCGT TGCGCTCAGC 1681 ACTCAACCCC AGAGTGTAGC TTAGGCTGAT GAGTCTGGAC ATCCCTCACC GGTGACGGTG 1741 GTCCAGGCTG CGTTGGCGGC CTACCTATGG CTAACGCCAT GGGACGCTAG TTGTGAACAA 1801 GGTGTGAAGA GCCTATTGAG CTACATAAGA ATCCTCCGGC CCCTGAATGC GGCTAATCCC 1861 AACCTCGGAG CAGGTGGTCA CAAACCAGTG ATTGGCCTGT CGTAACGCGC AAGTCCGTGG 1921 CGGAACCGAC TACTTTGGGT GTCCGTGTTT CCTTTTATTT TATTGTGGCT GCTTATGGTG 1981 ACAATCACAG ATTGTTATCA TAAAGCGAAT TGGATTGCGG CGCGCCGAAT TCGAAATGAC 2041 TTCGAAAGTT TATGATCCAG AACAAAGGAA ACGGATGATA ACTGGTCCGC AGTGGTGGGC 2101 CAGATGTAAA CAAATGAATG TTCTTGATTC ATTTATTAAT TATTATGATT CAGAAAAACA 2161 TGCAGAAAAT GCTGTTATTT TTTTACATGG TAACGCGGCC TCTTCTTATT TATGGCGACA 2221 TGTTGTGCCA CATATTGAGC CAGTAGCGCG GTGTATTATA CCAGACCTTA TTGGTATGGG 2281 CAAATCAGGC AAATCTGGTA ATGGTTCTTA TAGGTTACTT GATCATTACA AATATCTTAC 2341 TGCATGGTTT GAACTTCTTA ATTTACCAAA GAAGATCATT TTTGTCGGCC ATGATTGGGG 2401 TGCTTGTTTG GCATTTCATT ATAGCTATGA GCATCAAGAT AAGATCAAAG CAATAGTTCA 2461 CGCTGAAAGT GTAGTAGATG TGATTGAATC ATGGGATGAA TGGCCTGATA TTGAAGAAGA 2521 TATTGCGTTG ATCAAATCTG AAGAAGGAGA AAAAATGGTT TTGGAGAATA ACTTCTTCGT 2581 GGAAACCATG TTGCCATCAA AAATCATGAG AAAGTTAGAA CCAGAAGAAT TTGCAGCATA 2641 TCTTGAACCA TTCAAAGAGA AAGGTGAAGT TCGTCGTCCA ACATTATCAT GGCCTCGTGA 2701 AATCCCGTTA GTAAAAGGTG GTAAACCTGA CGTTGTACAA ATTGTTAGGA ATTATAATGC 2761 TTATCTACGT GCAAGTGATG ATTTACCAAA AATGTTTATT GAATCGGACC CAGGATTCTT 2821 TTCCAATGCT ATTGTTGAAG GTGCCAAGAA GTTTCCTAAT ACTGAATTTG TCAAAGTAAA 2881 AGGTCTTCAT TTTTCGCAAG AAGATGCACC TGATGAAATG GGAAAATATA TCAAATCGTT 2941 CGTTGAGCGA GTTCTCAAAA ATGAACAATA AGTCGACCTG CAGAAGCTTG CGCAGACGTC 3001 GCGCGCGGCC GCTTAAGCTA GCTTCGATCC AGACATGATA AGATACATTG ATGAGTTTGG 3061 ACAAACCACA ACTAGAATGC AGTGAAAAAA ATGCTTTATT TGTGAAATTT GTGATGCTAT 3121 TGCTTTATTT GTAACCATTA TAAGCTGCAA TAAACAAGTT AACAACAACA ATTGCATTCA 3181 TTTTATGTTT CAGGTTCAGG GGGAGGTGTG GGAGGTTTTT TAAAGCAAGT AAAACCTCTA 3241 CAAATGTGGT ATGGCTGATT ATGATCCTGC CTCGCGCGTT TCGGTGATGA CGGTGAAAAC 3301 CTCTGACACA TGCAGCTCCC GCCTTAATTA AGGGTTTAAA CCCGGTACCC AGTCACGTAG 3361 CGATAGCGGA GTGTACTGCA TTAATGAATC GGCCAACGCG CGGGGAGAGG CGGTTTGCGT 3421 ATTGGGCGCT CTTCCGCTTC CTCGCTCACT GACTCGCTGC GCTCGGTCGT TCGGCTGCGG 3481 CGAGCGGTAT CAGCTCACTC AAAGGCGGTA ATACGGTTAT CCACAGAATC AGGGGATAAC 3541 GCAGGAAAGA ACATGTGAGC AAAAGGCCAG CAAAAGGCCA GGAACCGTAA AAAGGCCGCG 3601 TTGCTGGCGT TtTTCCATAG GCTCCGCCCC CCTGACGAGC ATCACAAAAA TCGACGCTCA 3661 AGTCAGAGGT GGCGAAACCC GACAGGACTA TAAAGATACC AGGCGTTTCC CCCTGGAAGC 3721 TCCCTCGTGC GCTCTCCTGT TCCGACCCTG CCGCTTACCG GATACCTGTC CGCCTTTCTC 3781 CCTTCGGGAA GCGTGGCGCT TTCTCATAGC TCACGCTGTA GGTATCTCAG TTCGGTGTAG 3841 GTCGTTCGCT CCAAGCTGGG CTGTGTGCAC GAACCCCCCG TTCAGCCCGA CCGCTGCGCC 3901 TTATCCGGTA ACTATCGTCT TGAGTCCAAC CCGGTAAGAC ACGACTTATC GCCACTGGCA 3961 GCAGCCACTG GTAACAGGAT TAGCAGAGCG AGGTATGTAG GCGGTGCTAC AGAGTTCTTG 4021 AAGTGGTGGC CTAACTACGG CTACACTAGA AGGACAGTAT TTGGTATCTG CGCTCTGCTG 4081 AAGCCAGTTA CCTTCGGAAA AAGAGTTGGT AGCTCTTGAT CCGGCAAACA AACCACCGCT 4141 GGTAGCGGTG GTTTTTTTGT TTGCAAGCAG CAGATTACGC GCAGAAAAAA AGGATCTCAA 4201 GAAGATCCTT TGATCTTTTC TACGGGGTCT GACGCTCAGT GGAACGAAAA CTCACGTTAA 4261 GGGATTTTGG TCATGAGATT ATCAAAAAGG ATCTTCACCT AGATCCTTTT AAATTAAAAA 4321 TGAAGTTTTA AATCAATCTA AAGTATATAT GAGTAAACTT GGTCTGACAG TTACCAATGC 4381 TTAATCAGTG AGGCACCTAT CTCAGCGATC TGTCTATTTC GTTCATCCAT AGTTGCCTGA 4441 CTCCCCGTCG TGTAGATAAC TACGATACGG GAGGGCTTAC CATCTGGCCC CAGTGCTGCA 4501 ATGATACCGC GAGACCCACG CTCACCGGCT CCAGATTTAT CAGCAATAAA CCAGCCAGCC 4561 GGAAGGGCCG AGCGCAGAAG TGGTCCTGCA ACTTTATCCG CCTCCATCCA GTCTATTAAT 4621 TGTTGCCGGG AAGCTAGAGT AAGTAGTTCG CCAGTTAATA GTTTGCGCAA CGTTGTTGCC 4681 ATTGCTACAG GCATCGTGGT GTCACGCTCG TCGTTTGGTA TGGCTTCATT CAGCTCCGGT 4741 TCCCAACGAT CAAGGCGAGT TACATGATCC CCCATGTTGT GCAAAAAAGC GGTTAGCTCC 4801 TTCGGTCCTC CGATCGTTGT CAGAAGTAAG TTGGCCGCAG TGTTATCACT CATGGTTATG 4861 GCAGCACTGC ATAATTCTCT TACTGTCATG CCATCCGTAA GATGCTTTTC TGTGACTGGT 4921 GAGTACTCAA CCAAGTCATT CTGAGAATAG TGTATGCGGC GACCGAGTTG CTCTTGCCCG 4981 GCGTCAATAC GGGATAATAC CGCGCCACAT AGCAGAACTT TAAAAGTGCT CATCATTGGA 5041 AAACGTTCTT CGGGGCGAAA ACTCTCAAGG ATCTTACCGC TGTTGAGATC CAGTTCGATG 5101 TAACCCACTC GTGCACCCAA CTGATCTTCA GCATCTTTTA CTTTCACCAG CGTTTCTGGG 5161 TGAGCAAAAA CAGGAAGGCA AAATGCCGCA AAAAAGGGAA TAAGGGCGAC ACGGAAATGT 5221 TGAATACTCA TACTCTTCCT TTTTCAATAT TATTGAAGCA TTTATCAGGG TTATTGTCTC 5281 ATGAGCGGAT ACATATTTGA ATGTATTTAG AAAAATAAAC AAATAGGGGT TCCGCGCACA 5341 TTTCCCCGAA AAGTGCCACC TGACGTCGGT ACCATTTAAA TATCGATAAG //