The list of IRES trans-acting factors is unfortunately not yet complete neither is the list of ribosomal and other proteins found to interact with IRES directly or indirectly.
IRESite Id IRES name Gene name IRES
found
in
IRES size [nt] mRNA origin ITAF abbrev. Other interacting proteins
618 ABPV_IGRpred ABPV Acute bee ... 199 viral
416 AEV AEV Avian ence... 494 viral
619 ALPV_IGRpred ALPV Aphid leth... 184 viral
620 BQCV_IGRpred BQCV Black quee... 190 viral
37 BVDV1_1-385
BVDV1_29-391
BVDV1 Bovine vir... 385
363
viral
40 CrPV_5NCR
CrPV_IGR
CrPV Cricket pa... 708
192
viral eIF4G
39 crTMV_IREScp
crTMV_IRESmp75
crTMV_IRESmp228
crTMV Crucifer t... 146
75
228
viral
603 crTMV_IREScp crTMV Crucifer t... 148 viral
602 crTMV_IREScp crTMV Crucifer t... 148 viral
148 CSFV CSFV Classical ... 373 viral RPS9
225 CVB3 CVB3 Human coxs... 750 viral La
621 DCV_IGR DCV Drosophila... 189 viral
140 EMCV-R EMCV-R Encephalom... 576 viral PTB
hnRNP_D
627 EoPV_5NTR EoPV Ectropis o... 390 viral
286 ERAV_245-961 ERAV Equine rhi... 712 viral
26 ERBV_162-920 ERBV Equine rhi... 759 viral
637 EV71_1-748 EV71 Human ente... 748 viral PTB
Unr
PCBP-1
PCBP-2
hnRNP_A1
FBP2
577 FeLV-Notch2 FeLV-Notch2 Felis silv... 238 viral
321 FMDV_type_C FMDV Foot-and-m... 461 viral PTB
ITAF45
PCBP1/hnRNP_E1
hnRNP_K
PCBP2/hnRNP_E2
PA2G4
eIF2c
eIF4b
eEF2
PABP2
38 GBV-A GBV-A Hepatitis ... 693 viral
54 GBV-B GBV-B Hepatitis ... 416 viral
41 GBV-C GBV-C Hepatitis ... 630 viral
69 gypsy_env
gypsyD5
gypsyD2
Gypsy Drosophila... 330
261
517
viral
42 HAV_HM175 HAV Human hepa... 584 viral eIF4G
PTB
PCBP-2
222 HCV_type_1a HCV_type_1a Hepatitis ... 383 viral PTB-1
La
hnRNP_D
NSAP1
hnRNP_R
hnRNP_L
eIF3b
RPS5
IGF2BP1
eIF3_p170
616 HiPV_IGRpred HiPV Himetobi P... 188 viral
73 HIV-1 HIV-1 Human Immu... 233 viral
622 HoCV1_IGRpred HoCV-1 Homalodisc... 188 viral
139 HRV-2 HRV2 Human rhin... 604 viral Unr
PCBP-2
PTB
623 IAPV_IGRpred IAPV Israel acu... 199 viral
68 idefix Idefix Drosophila... 521 viral
624 KBV_IGRpred KBV Kashmir be... 202 viral
322 LINE-1_ORF1_-101_to_-1
LINE-1_ORF1_-302_to_-202
LINE-1_ORF2_-138_to_-86
LINE-1_ORF1_-44_to_-1
LINE-1 Mus musculus 101
101
53
47
viral
59 PSIV_IGR PSIV Plautia st... 145 viral RPS25
598 PV_type3_Leon PV Human poli... 742 viral
242 PV_type1_Mahoney PV Human poli... 312 viral PTB
Unr
PCBP-2
La
435 REV-A REV-A Reticuloen... 577 viral
437 RhPV_5NCR
RhPV_IGR
RhPV Rhopalosip... 579
232
viral eIF1
eIF2
eIF3
eIF1A
eIF4G
eIF4A
625 SINV1_IGRpred SINV-1 Solenopsis... 200 viral
596 SV40_661-830 SV40 Simian vir... 170 viral
597 TMEV TMEV Theiler's ... 1040 viral
615 TMV_UI_IRESmp228 TMV_type1 Tobacco mo... 231 viral
626 TRV_5NTR
TrV_IGR
TrV Triatoma v... 694
221
viral
77 TSV_IGR TSV Taura synd... 250 viral
Last change to the database: 2011-04-08 22:43:22 GMT+1