IRESite Id IRES name IRES functional status IRES overlaps with promoter Gene/virus name IRES from gene Plasmid name Record
type
IRES Seq Id IRES Struct Id 2D Struct Id IRES
found
in
Translated
in
Transl.
method
mRNA topol. O
R
F
#
Alternat. translat. init. ORF
frame-
shift
Transl.
read-
through
mRNA size [nt] IRES size [nt] mRNA origin IRES origin in eng. mRNA
140 EMCV-R no EMCV-R natur... 685 59 Encephalom... linear 1 no 0 no 7835 576 viral
550 EMCV-R_-541_-7 functional not tested EMCV-R MoMLV-provirus-EMCV-GFP plasm... 1769 Encephalom... 2xHomo sap... 2xin vivo linear 3 not ... 0
0
0
no
yes
no
9525 542 viral
590 EMCV-R_260-831 functional not tested EMCV-R pEMCV-F plasm... 1870 Encephalom... 1xMus musc... 1xin vivo linear 1 not ... 0 no 2858 580 viral
585 EMCV-R_260-831 functional not tested EMCV-R pR-EMCV-F plasm... 1870 Encephalom... 1xHomo sapiens
1xMus musculus
1xin vivo
1xin vivo
linear 2 not ... 0
0
no
no
3854 580 viral
353 EMCV-R_260-841 functional not tested EMCV-R pEMCV.IRES-luc plasm... 1187 Encephalom... 1xHeLa cel... 1xin vitro linear 1 not ... 0 no 2479 583 viral
354 EMCV-R_260-841 functional not tested EMCV-R pEMCV.IRES-luc-pA plasm... 1187 Encephalom... 1xHeLa cel... 1xin vitro linear 1 not ... 0 no 2575 583 viral
608 EMCV-R_315-845 functional not tested EMCV-R H-GFP-IRESemcv-GUS plasm... 1931 Encephalom... 1xrabbit r... 1xin vitro
1xin vitro
1xin vivo
linear 2 not ... 0
0
no
no
3127 531 viral
543 EMCV-R+12_mut functional not tested EMCV-R pIRES plasm... 1206 Encephalom... linear 1 not ... 0 no 1132 587 viral
358 EMCV-R+12_mut functional not tested EMCV-R pIRESneo plasm... 1206 Encephalom... linear 1 not ... 0 no 1870 587 viral
557 EMCV-R_-541_-7 functional not tested EMCV-R pGLuc-EMCV-GFP plasm... 1769 Encephalom... linear 2 not ... 0
0
no
no
2199 542 viral
582 EMCV-R_245-832 functional not tested EMCV-R pIRES-lacZ plasm... 1863 Encephalom... linear 1 not ... 0 no 3818 588 nuclear
428 EMCV-R_259-825 functional not tested EMCV-R pEMCV-D260-837 plasm... 1385 Encephalom... linear 2 not ... 0
0
no
no
2863 567 viral
460 EMCV-R_259-825 functional no EMCV-R pEMCV-D260-837 plasm... 1385 Encephalom... linear 2 not ... 0
0
no
no
5018 567 viral
227 EMCV-R_260-832 functional no EMCV-R pR-EMCV-F plasm... 782 Encephalom... linear 2 not ... 0
0
no
no
3653 578 viral
230 EMCV-R_260-832 functional not tested EMCV-R pR-EMCV-F plasm... 782 Encephalom... linear 2 not ... 0
0
no
no
3768 578 viral
349 EMCV-R_260-832 functional not tested EMCV-R pREMCVF plasm... 1177 Encephalom... linear 2 not ... 0
0
no
no
3658 578 viral
380 EMCV-R_260-845 functional not tested EMCV-R pCBio plasm... 1271 Encephalom... linear 1 not ... 0 no 2710 587 viral
386 EMCV-R_260-845 functional not tested EMCV-R pIREShyg plasm... 1268 Encephalom... linear 1 not ... 0 no 2204 587 viral
379 EMCV-R_260-845 functional not tested EMCV-R pLXRN plasm... 1268 Encephalom... linear 1 not ... 0 no 2706 587 viral
384 EMCV-R_260-845 functional not tested EMCV-R pNBio plasm... 1271 Encephalom... linear 1 not ... 0 no 2771 587 viral
382 EMCV-R_260-845 functional not tested EMCV-R pNBioSec plasm... 1271 Encephalom... linear 1 not ... 0 no 2908 587 viral
263 EMCV-R_261-845 functional not tested EMCV-R pCAT-EMCV-eGFP plasm... 870 Encephalom... linear 2 not ... 0
0
no
no
2353 587 viral
245 EMCV-R_271-831 functional no (not co... EMCV-R pBSRLucEFluc plasm... 831 Encephalom... linear 2 not ... 0
0
no
no
3654 562 viral
326 EMCV-R_272-831 functional not tested EMCV-R pBSFLucERLuc plasm... 1056 Encephalom... linear 2 no
no
0
0
no
no
3851 562 viral
292 EMCV-R_281-827 functional not tested EMCV-R pEMCV plasm... 950 Encephalom... linear 2 no
not tested
0
0
no
no
2766 547 viral
546 EMCV-R_281-833 functional not tested EMCV-R pF/R-wt plasm... 1761 Encephalom... linear 2 not ... 0
0
no
no
3724 553 viral
547 EMCV-R_281-833 functional not tested EMCV-R pF/R-wt plasm... 1761 Encephalom... linear 2 not ... 0
0
no
no
3426 553 viral
544 EMCV-R_335-834 functional not tested EMCV-R pCITE-2a plasm... 1755 Encephalom... linear 1 not ... 0 no 642 500 viral
545 EMCV-R_335-834 functional not tested EMCV-R pCITE-4a plasm... 1758 Encephalom... linear 1 not ... 0 no 806 500 viral
234 EMCV functional no EMCV (deltaSV40)R-EMCV-F promo... 782 Encephalom... 2 not ... 0
0
no
no
578 viral
Last change to the database: 2015-04-16 16:45:23 GMT+1