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IRESite: The database of experimentally verified IRES structures |  |
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| IRESite Id | IRES name | IRES functional status | IRES overlaps with promoter | Gene/virus name | IRES from gene | Plasmid name | Record type |
IRES Seq Id | IRES Struct Id | 2D Struct Id | IRES found in |
Translated in |
Transl. method |
mRNA topol. | O R F # |
Alternat. translat. init. | ORF frame- shift |
Transl. read- through |
mRNA size [nt] | IRES size [nt] | mRNA origin | IRES origin in eng. mRNA |
| 222 | HCV_type_1a | yes | HCV_type_1a | natur... | 1882 | 51 | 51 65 66 67 68 |
Hepatitis ... | linear | 1 | not ... | 0 | no | 9416 | 383 | viral | ||||||
| 90 | HCV_type_1a | functional | not tested | HCV1a | pFGAL4-HCV1 | plasm... | 222 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no yes |
0 0 |
no no |
4710 | 385 | viral | ||||
| 98 | HCV_type_1a | functional | not tested | HCV1a | pFGAL4-L270-HCV1 | plasm... | 222 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 3 | no no yes |
0 0 0 |
no no no |
4960 | 385 | viral | ||||
| 93 | HCV_type_1a | functional | not tested | HCV1a | pFGAL4A/UUGh-HCV1 | plasm... | 222 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no no |
0 0 |
no no |
4752 | 385 | viral | ||||
| 86 | HCV_type_1a | functional | no | HCV1a | pFGAL4h-HCV1 | plasm... | 222 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no yes |
0 0 |
no no |
4752 | 385 | viral | ||||
| 375 | HCV_type_1a | functional | not tested | HCV1a | pRG-HCV1 | plasm... | 222 | Hepatitis ... | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
2073 | 385 | viral | ||||
| 94 | HCV_type_1a_A/UUG | defective | not tested | HCV1a | pFGAL4A/UUGh-HCV1A/UUG | plasm... | 235 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no no |
0 0 |
no no |
4752 | 385 | viral | ||||
| 91 | HCV_type_1a_A/UUG | defective | not tested | HCV1a | pFGAL4h-HCV1A/UUG | plasm... | 235 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no yes |
0 0 |
no no |
4752 | 385 | viral | ||||
| 376 | HCV_type_1a_A/UUG | defective | not tested | HCV1a | pRG-HCV1A/UUG | plasm... | 235 | Hepatitis ... | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
2073 | 385 | viral | ||||
| 92 | HCV_type_1a_ACCAUG/AUGACC | defective | not tested | HCV1a | pFGAL4h-HCV1ACCAUG/AUGACC | plasm... | 238 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no yes |
0 0 |
no no |
4752 | 385 | viral | ||||
| 95 | HCV_type_1a_delta15AA | defective | not tested | HCV1a | pFGAL4h-HCV1delta15AA | plasm... | 245 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no no |
0 0 |
no no |
4708 | 342 | viral | ||||
| 88 | HCV_type_1a_mut3 | defective | not tested | HCV1a | pFGAL4h-HCV3 | plasm... | 229 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no yes |
0 0 |
no no |
4756 | 389 | viral | ||||
| 99 | HCV_type_1a_rc | defective | not tested | HCV1a | pFGAL4-L270-HCV1rc | plasm... | 248 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 3 | no no no |
0 0 0 |
no no no |
4960 | 385 | viral | ||||
| 96 | HCV_type_1a_rc | defective | not tested | HCV1a | pFGAL4h-HCV1rc | plasm... | 248 | Hepatitis ... | 1xSaccharo... | 1xin vivo | linear | 2 | no no |
0 0 |
no no |
4770 | 385 | viral | ||||
| 377 | HCV_type_1a_rc | defective | not tested | HCV1a | pRG-HCV1rc | plasm... | 248 | Hepatitis ... | 1xHomo sap... | 1xin vivo | linear | 2 | not ... | 0 0 |
no no |
2063 | 385 | nuclear | ||||
| 224 | HCV_type_1a | functional | not tested | HCV_typ... | pRL_1a | plasm... | 1016 | Hepatitis ... | linear | 2 | no no |
0 0 |
no no |
2967 | 339 | viral | ||||||
| 372 | HCV_type_1a | functional | not tested | HCV1a | pRG(-P)IRES | promo... | 222 | Hepatitis ... | 2 | not ... | 0 0 |
no no |
385 | viral |